Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
IFNA1P01562 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
IFNA1P01562 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.75□□□□□ -0.37
IFNA1P01562 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 MIR662-201ENST00000384847 95 ntBASIC12.75□□□□□ -0.37
IFNA1P01562 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.75□□□□□ -0.37
IFNA1P01562 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
IFNA1P01562 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.75□□□□□ -0.37
IFNA1P01562 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.75□□□□□ -0.37
IFNA1P01562 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 MPDU1-223ENST00000582151 728 ntBASIC12.75□□□□□ -0.37
IFNA1P01562 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.75□□□□□ -0.37
IFNA1P01562 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IFNA1P01562 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
IFNA1P01562 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
IFNA1P01562 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.74□□□□□ -0.37
IFNA1P01562 AGAP7P-201ENST00000582299 2062 ntBASIC12.74□□□□□ -0.37
IFNA1P01562 AGAP14-201ENST00000624701 2060 ntBASIC12.74□□□□□ -0.37
IFNA1P01562 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.74□□□□□ -0.37
IFNA1P01562 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IFNA1P01562 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
IFNA1P01562 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms