Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PDGFBP01127 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.92■□□□□ 0.14
PDGFBP01127 IQSEC3P1-201ENST00000538799 536 ntBASIC15.92■□□□□ 0.14
PDGFBP01127 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.92■□□□□ 0.14
PDGFBP01127 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.92■□□□□ 0.14
PDGFBP01127 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.92■□□□□ 0.14
PDGFBP01127 MIR3147-201ENST00000577811 66 ntBASIC15.92■□□□□ 0.14
PDGFBP01127 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.92■□□□□ 0.14
PDGFBP01127 RN7SL574P-201ENST00000581512 297 ntBASIC15.92■□□□□ 0.14
PDGFBP01127 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PDGFBP01127 AC093813.1-201ENST00000605066 256 ntBASIC15.92■□□□□ 0.14
PDGFBP01127 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 AC138649.2-201ENST00000615886 705 ntBASIC15.92■□□□□ 0.14
PDGFBP01127 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.92■□□□□ 0.14
PDGFBP01127 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.92■□□□□ 0.14
PDGFBP01127 AL353726.2-201ENST00000623259 884 ntBASIC15.92■□□□□ 0.14
PDGFBP01127 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.92■□□□□ 0.14
PDGFBP01127 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.92■□□□□ 0.14
PDGFBP01127 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.92■□□□□ 0.14
PDGFBP01127 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.92■□□□□ 0.14
PDGFBP01127 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.92■□□□□ 0.14
PDGFBP01127 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.92■□□□□ 0.14
PDGFBP01127 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFBP01127 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PDGFBP01127 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PDGFBP01127 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFBP01127 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFBP01127 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PDGFBP01127 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.91■□□□□ 0.14
PDGFBP01127 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PDGFBP01127 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PDGFBP01127 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.91■□□□□ 0.14
PDGFBP01127 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.91■□□□□ 0.14
PDGFBP01127 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.91■□□□□ 0.14
PDGFBP01127 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PDGFBP01127 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.91■□□□□ 0.14
PDGFBP01127 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFBP01127 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
PDGFBP01127 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PDGFBP01127 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 AC134043.2-201ENST00000624206 2238 ntBASIC15.91■□□□□ 0.14
PDGFBP01127 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.91■□□□□ 0.14
PDGFBP01127 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFBP01127 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
PDGFBP01127 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFBP01127 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFBP01127 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
PDGFBP01127 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.9■□□□□ 0.14
PDGFBP01127 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 CNN2P10-201ENST00000443067 918 ntBASIC15.9■□□□□ 0.14
PDGFBP01127 KRT18P25-201ENST00000508931 1278 ntBASIC15.9■□□□□ 0.14
PDGFBP01127 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFBP01127 AP002490.2-201ENST00000524791 560 ntBASIC15.9■□□□□ 0.14
PDGFBP01127 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PDGFBP01127 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PDGFBP01127 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.9■□□□□ 0.14
PDGFBP01127 AC007663.3-201ENST00000609632 465 ntBASIC15.9■□□□□ 0.14
PDGFBP01127 AP005019.2-201ENST00000615104 511 ntBASIC15.9■□□□□ 0.14
PDGFBP01127 HLA-C-210ENST00000640219 976 ntBASIC15.9■□□□□ 0.14
PDGFBP01127 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFBP01127 AL023775.1-201ENST00000454907 1746 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms