Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 AC004987.2-201ENST00000395959 1148 ntBASIC16.92■□□□□ 0.3
RTN3O95197 AC236430.1-201ENST00000402231 743 ntBASIC16.92■□□□□ 0.3
RTN3O95197 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.92■□□□□ 0.3
RTN3O95197 TERF1P3-201ENST00000505638 1227 ntBASIC16.92■□□□□ 0.3
RTN3O95197 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.92■□□□□ 0.3
RTN3O95197 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.92■□□□□ 0.3
RTN3O95197 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.92■□□□□ 0.3
RTN3O95197 LINC02560-201ENST00000596379 459 ntBASIC16.92■□□□□ 0.3
RTN3O95197 AL033527.5-202ENST00000641632 1098 ntBASIC16.92■□□□□ 0.3
RTN3O95197 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RTN3O95197 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 AL136982.4-201ENST00000437689 1740 ntBASIC16.92■□□□□ 0.3
RTN3O95197 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.92■□□□□ 0.3
RTN3O95197 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RTN3O95197 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RTN3O95197 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.92■□□□□ 0.3
RTN3O95197 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RTN3O95197 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.92■□□□□ 0.3
RTN3O95197 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RTN3O95197 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTN3O95197 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RTN3O95197 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.91■□□□□ 0.3
RTN3O95197 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RTN3O95197 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 AL691432.1-201ENST00000596308 1422 ntBASIC16.91■□□□□ 0.3
RTN3O95197 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.91■□□□□ 0.3
RTN3O95197 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.91■□□□□ 0.3
RTN3O95197 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RTN3O95197 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.91■□□□□ 0.3
RTN3O95197 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.91■□□□□ 0.3
RTN3O95197 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.91■□□□□ 0.3
RTN3O95197 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.91■□□□□ 0.3
RTN3O95197 AC138761.1-201ENST00000584393 385 ntBASIC16.91■□□□□ 0.3
RTN3O95197 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 AC008761.3-201ENST00000624803 892 ntBASIC16.91■□□□□ 0.3
RTN3O95197 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.91■□□□□ 0.3
RTN3O95197 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 BTBD7P1-201ENST00000447253 1453 ntBASIC16.91■□□□□ 0.3
RTN3O95197 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.91■□□□□ 0.3
RTN3O95197 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.91■□□□□ 0.3
RTN3O95197 AC007950.2-201ENST00000615045 2347 ntBASIC16.91■□□□□ 0.3
RTN3O95197 TSPY26P-202ENST00000565928 3884 ntBASIC16.91■□□□□ 0.3
RTN3O95197 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTN3O95197 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN3O95197 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RTN3O95197 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.9■□□□□ 0.3
RTN3O95197 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTN3O95197 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.9■□□□□ 0.3
RTN3O95197 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTN3O95197 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTN3O95197 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTN3O95197 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms