Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.39□□□□□ -0.11
CDRT1O95170 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.39□□□□□ -0.11
CDRT1O95170 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CDRT1O95170 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.39□□□□□ -0.11
CDRT1O95170 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDRT1O95170 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CDRT1O95170 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CDRT1O95170 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDRT1O95170 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.39□□□□□ -0.11
CDRT1O95170 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT1O95170 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.39□□□□□ -0.11
CDRT1O95170 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDRT1O95170 AC232323.1-201ENST00000540724 2099 ntBASIC14.38□□□□□ -0.11
CDRT1O95170 REXO1L5P-201ENST00000622260 2098 ntBASIC14.38□□□□□ -0.11
CDRT1O95170 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT1O95170 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDRT1O95170 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT1O95170 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.38□□□□□ -0.11
CDRT1O95170 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.38□□□□□ -0.11
CDRT1O95170 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.38□□□□□ -0.11
CDRT1O95170 CYP2A7P1-201ENST00000595391 815 ntBASIC14.38□□□□□ -0.11
CDRT1O95170 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 NCF1C-201ENST00000438382 1427 ntBASIC14.38□□□□□ -0.11
CDRT1O95170 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CDRT1O95170 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT1O95170 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT1O95170 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT1O95170 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDRT1O95170 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT1O95170 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT1O95170 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.37□□□□□ -0.11
CDRT1O95170 AC090616.6-203ENST00000579186 1945 ntBASIC14.37□□□□□ -0.11
CDRT1O95170 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CDRT1O95170 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.37□□□□□ -0.11
CDRT1O95170 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 ATP5G2P1-201ENST00000433580 426 ntBASIC14.37□□□□□ -0.11
CDRT1O95170 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.37□□□□□ -0.11
CDRT1O95170 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT1O95170 PRYP5-201ENST00000451909 266 ntBASIC14.37□□□□□ -0.11
CDRT1O95170 KRT16P4-201ENST00000453883 522 ntBASIC14.37□□□□□ -0.11
CDRT1O95170 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.37□□□□□ -0.11
CDRT1O95170 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDRT1O95170 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDRT1O95170 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms