Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 MIR661-201ENST00000384842 89 ntBASIC16.33■□□□□ 0.2
CLDN11O75508 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.33■□□□□ 0.2
CLDN11O75508 AC136604.1-201ENST00000418535 575 ntBASIC16.33■□□□□ 0.2
CLDN11O75508 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN11O75508 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN11O75508 TERF1P3-201ENST00000505638 1227 ntBASIC16.33■□□□□ 0.2
CLDN11O75508 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 SERBP1P5-201ENST00000510079 1181 ntBASIC16.33■□□□□ 0.2
CLDN11O75508 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN11O75508 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN11O75508 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CLDN11O75508 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN11O75508 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDN11O75508 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN11O75508 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN11O75508 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN11O75508 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN11O75508 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 AC112504.1-201ENST00000623415 1841 ntBASIC16.33■□□□□ 0.2
CLDN11O75508 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 AC024909.3-201ENST00000611513 2257 ntBASIC16.33■□□□□ 0.2
CLDN11O75508 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN11O75508 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN11O75508 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CLDN11O75508 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN11O75508 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN11O75508 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN11O75508 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN11O75508 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN11O75508 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.32■□□□□ 0.2
CLDN11O75508 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN11O75508 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN11O75508 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN11O75508 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN11O75508 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN11O75508 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN11O75508 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN11O75508 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.32■□□□□ 0.2
CLDN11O75508 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.32■□□□□ 0.2
CLDN11O75508 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.32■□□□□ 0.2
CLDN11O75508 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.32■□□□□ 0.2
CLDN11O75508 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.32■□□□□ 0.2
CLDN11O75508 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 AC004461.2-201ENST00000629517 803 ntBASIC16.32■□□□□ 0.2
CLDN11O75508 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN11O75508 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN11O75508 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLDN11O75508 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN11O75508 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms