Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 AC108751.1-201ENST00000490852 363 ntBASIC18.37■□□□□ 0.53
GADD45BO75293 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.37■□□□□ 0.53
GADD45BO75293 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
GADD45BO75293 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.37■□□□□ 0.53
GADD45BO75293 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.37■□□□□ 0.53
GADD45BO75293 FAM215A-202ENST00000632077 792 ntBASIC18.37■□□□□ 0.53
GADD45BO75293 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GADD45BO75293 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
GADD45BO75293 KRT8P44-201ENST00000441609 1350 ntBASIC18.37■□□□□ 0.53
GADD45BO75293 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GADD45BO75293 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GADD45BO75293 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GADD45BO75293 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GADD45BO75293 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.37■□□□□ 0.53
GADD45BO75293 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.37■□□□□ 0.53
GADD45BO75293 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GADD45BO75293 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GADD45BO75293 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.37■□□□□ 0.53
GADD45BO75293 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.37■□□□□ 0.53
GADD45BO75293 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GADD45BO75293 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GADD45BO75293 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.37■□□□□ 0.53
GADD45BO75293 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.36■□□□□ 0.53
GADD45BO75293 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.36■□□□□ 0.53
GADD45BO75293 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GADD45BO75293 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GADD45BO75293 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GADD45BO75293 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.36■□□□□ 0.53
GADD45BO75293 AC092910.1-201ENST00000482027 1129 ntBASIC18.36■□□□□ 0.53
GADD45BO75293 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.36■□□□□ 0.53
GADD45BO75293 AC109635.5-201ENST00000533593 962 ntBASIC18.36■□□□□ 0.53
GADD45BO75293 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.36■□□□□ 0.53
GADD45BO75293 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.36■□□□□ 0.53
GADD45BO75293 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.36■□□□□ 0.53
GADD45BO75293 LINC01711-201ENST00000598340 967 ntBASIC18.36■□□□□ 0.53
GADD45BO75293 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GADD45BO75293 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GADD45BO75293 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GADD45BO75293 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.35■□□□□ 0.53
GADD45BO75293 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GADD45BO75293 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GADD45BO75293 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.35■□□□□ 0.53
GADD45BO75293 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.35■□□□□ 0.53
GADD45BO75293 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 VN2R19P-201ENST00000442399 1052 ntBASIC18.35■□□□□ 0.53
GADD45BO75293 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.35■□□□□ 0.53
GADD45BO75293 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.35■□□□□ 0.53
GADD45BO75293 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.35■□□□□ 0.53
GADD45BO75293 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.35■□□□□ 0.53
GADD45BO75293 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GADD45BO75293 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.35■□□□□ 0.53
GADD45BO75293 AC010507.1-201ENST00000633895 436 ntBASIC18.35■□□□□ 0.53
GADD45BO75293 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GADD45BO75293 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GADD45BO75293 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.35■□□□□ 0.53
GADD45BO75293 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
GADD45BO75293 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GADD45BO75293 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.35■□□□□ 0.53
GADD45BO75293 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.35■□□□□ 0.53
GADD45BO75293 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GADD45BO75293 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GADD45BO75293 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms