Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PEX1O43933 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PEX1O43933 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PEX1O43933 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.75■□□□□ 0.11
PEX1O43933 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PEX1O43933 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.75■□□□□ 0.11
PEX1O43933 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.75■□□□□ 0.11
PEX1O43933 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PEX1O43933 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PEX1O43933 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PEX1O43933 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.75■□□□□ 0.11
PEX1O43933 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 AL590787.1-201ENST00000568856 1315 ntBASIC15.74■□□□□ 0.11
PEX1O43933 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PEX1O43933 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.74■□□□□ 0.11
PEX1O43933 AC004832.2-201ENST00000426397 482 ntBASIC15.74■□□□□ 0.11
PEX1O43933 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 HCG4B-203ENST00000450128 991 ntBASIC15.74■□□□□ 0.11
PEX1O43933 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.74■□□□□ 0.11
PEX1O43933 AC013467.2-201ENST00000605472 835 ntBASIC15.74■□□□□ 0.11
PEX1O43933 AC010654.1-201ENST00000615722 808 ntBASIC15.74■□□□□ 0.11
PEX1O43933 CICP24-201ENST00000605464 2705 ntBASIC15.74■□□□□ 0.11
PEX1O43933 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.74■□□□□ 0.11
PEX1O43933 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.74■□□□□ 0.11
PEX1O43933 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PEX1O43933 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.74■□□□□ 0.11
PEX1O43933 TMBIM7P-203ENST00000641617 1718 ntBASIC15.74■□□□□ 0.11
PEX1O43933 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEX1O43933 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.74■□□□□ 0.11
PEX1O43933 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
PEX1O43933 RPSAP43-201ENST00000402237 625 ntBASIC15.73■□□□□ 0.11
PEX1O43933 GPX1P2-201ENST00000429271 606 ntBASIC15.73■□□□□ 0.11
PEX1O43933 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.73■□□□□ 0.11
PEX1O43933 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.73■□□□□ 0.11
PEX1O43933 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.73■□□□□ 0.11
PEX1O43933 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 MTDHP5-201ENST00000598980 586 ntBASIC15.73■□□□□ 0.11
PEX1O43933 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.73■□□□□ 0.11
PEX1O43933 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 AC069224.1-201ENST00000566372 1715 ntBASIC15.73■□□□□ 0.11
PEX1O43933 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEX1O43933 AL021920.2-201ENST00000624828 1351 ntBASIC15.73■□□□□ 0.11
PEX1O43933 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.73■□□□□ 0.11
PEX1O43933 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms