Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.21■□□□□ 0.19
KDELR3O43731 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDELR3O43731 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.21■□□□□ 0.19
KDELR3O43731 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.21■□□□□ 0.19
KDELR3O43731 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.21■□□□□ 0.19
KDELR3O43731 AC074044.1-201ENST00000609673 707 ntBASIC16.21■□□□□ 0.19
KDELR3O43731 AC004840.1-201ENST00000636359 365 ntBASIC16.21■□□□□ 0.19
KDELR3O43731 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.21■□□□□ 0.19
KDELR3O43731 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KDELR3O43731 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDELR3O43731 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
KDELR3O43731 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KDELR3O43731 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
KDELR3O43731 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KDELR3O43731 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
KDELR3O43731 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
KDELR3O43731 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KDELR3O43731 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KDELR3O43731 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
KDELR3O43731 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.2■□□□□ 0.18
KDELR3O43731 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
KDELR3O43731 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.2■□□□□ 0.18
KDELR3O43731 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KDELR3O43731 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.2■□□□□ 0.18
KDELR3O43731 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.2■□□□□ 0.18
KDELR3O43731 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.2■□□□□ 0.18
KDELR3O43731 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.2■□□□□ 0.18
KDELR3O43731 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.2■□□□□ 0.18
KDELR3O43731 AC135586.1-201ENST00000539323 574 ntBASIC16.2■□□□□ 0.18
KDELR3O43731 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.2■□□□□ 0.18
KDELR3O43731 MIR4313-201ENST00000580760 101 ntBASIC16.2■□□□□ 0.18
KDELR3O43731 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
KDELR3O43731 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
KDELR3O43731 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.2■□□□□ 0.18
KDELR3O43731 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.2■□□□□ 0.18
KDELR3O43731 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KDELR3O43731 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDELR3O43731 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.2■□□□□ 0.18
KDELR3O43731 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 LINC02199-201ENST00000506655 2702 ntBASIC16.19■□□□□ 0.18
KDELR3O43731 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
KDELR3O43731 FAM8A3P-201ENST00000427218 844 ntBASIC16.19■□□□□ 0.18
KDELR3O43731 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.19■□□□□ 0.18
KDELR3O43731 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.19■□□□□ 0.18
KDELR3O43731 AC004461.2-201ENST00000629517 803 ntBASIC16.19■□□□□ 0.18
KDELR3O43731 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.19■□□□□ 0.18
KDELR3O43731 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KDELR3O43731 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 AC018695.7-201ENST00000624587 2492 ntBASIC16.19■□□□□ 0.18
KDELR3O43731 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms