Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14□□□□□ -0.17
XRCC2O43543 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 AP005117.1-202ENST00000581724 1908 ntBASIC14□□□□□ -0.17
XRCC2O43543 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14□□□□□ -0.17
XRCC2O43543 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14□□□□□ -0.17
XRCC2O43543 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14□□□□□ -0.17
XRCC2O43543 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14□□□□□ -0.17
XRCC2O43543 IGHV3-62-201ENST00000520057 340 ntBASIC14□□□□□ -0.17
XRCC2O43543 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14□□□□□ -0.17
XRCC2O43543 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14□□□□□ -0.17
XRCC2O43543 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14□□□□□ -0.17
XRCC2O43543 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14□□□□□ -0.17
XRCC2O43543 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14□□□□□ -0.17
XRCC2O43543 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14□□□□□ -0.17
XRCC2O43543 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
XRCC2O43543 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.99□□□□□ -0.17
XRCC2O43543 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
XRCC2O43543 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.99□□□□□ -0.17
XRCC2O43543 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
XRCC2O43543 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
XRCC2O43543 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
XRCC2O43543 DNAJB3-201ENST00000446806 729 ntBASIC13.99□□□□□ -0.17
XRCC2O43543 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.99□□□□□ -0.17
XRCC2O43543 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
XRCC2O43543 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
XRCC2O43543 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 AC011477.6-201ENST00000604980 1927 ntBASIC13.99□□□□□ -0.17
XRCC2O43543 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
XRCC2O43543 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.99□□□□□ -0.17
XRCC2O43543 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
XRCC2O43543 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
XRCC2O43543 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XRCC2O43543 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
XRCC2O43543 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.99□□□□□ -0.17
XRCC2O43543 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.98□□□□□ -0.17
XRCC2O43543 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.98□□□□□ -0.17
XRCC2O43543 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.98□□□□□ -0.17
XRCC2O43543 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
XRCC2O43543 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
XRCC2O43543 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
XRCC2O43543 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
XRCC2O43543 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.98□□□□□ -0.17
XRCC2O43543 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
XRCC2O43543 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
XRCC2O43543 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms