Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.04■□□□□ 0.32
CEP290O15078 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 BNIP3P1-202ENST00000550043 1585 ntBASIC17.04■□□□□ 0.32
CEP290O15078 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CEP290O15078 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CEP290O15078 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CEP290O15078 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CEP290O15078 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.04■□□□□ 0.32
CEP290O15078 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.04■□□□□ 0.32
CEP290O15078 FTLP5-201ENST00000586853 534 ntBASIC17.04■□□□□ 0.32
CEP290O15078 AC092171.5-201ENST00000608012 942 ntBASIC17.04■□□□□ 0.32
CEP290O15078 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.04■□□□□ 0.32
CEP290O15078 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.04■□□□□ 0.32
CEP290O15078 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CEP290O15078 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CEP290O15078 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CEP290O15078 AC074138.1-201ENST00000611182 1303 ntBASIC17.03■□□□□ 0.32
CEP290O15078 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 DDX39AP1-201ENST00000445147 1181 ntBASIC17.03■□□□□ 0.32
CEP290O15078 AP003171.2-201ENST00000528208 925 ntBASIC17.03■□□□□ 0.32
CEP290O15078 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.03■□□□□ 0.32
CEP290O15078 ZACNP1-201ENST00000612259 710 ntBASIC17.03■□□□□ 0.32
CEP290O15078 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CEP290O15078 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.03■□□□□ 0.32
CEP290O15078 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.03■□□□□ 0.32
CEP290O15078 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CEP290O15078 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.03■□□□□ 0.32
CEP290O15078 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.03■□□□□ 0.32
CEP290O15078 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.03■□□□□ 0.32
CEP290O15078 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.03■□□□□ 0.32
CEP290O15078 AC116345.2-201ENST00000512837 523 ntBASIC17.03■□□□□ 0.32
CEP290O15078 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.03■□□□□ 0.32
CEP290O15078 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.03■□□□□ 0.32
CEP290O15078 C2orf69P1-201ENST00000563532 1093 ntBASIC17.03■□□□□ 0.32
CEP290O15078 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.03■□□□□ 0.32
CEP290O15078 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.03■□□□□ 0.32
CEP290O15078 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CEP290O15078 AC087045.2-201ENST00000606279 1003 ntBASIC17.03■□□□□ 0.32
CEP290O15078 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.03■□□□□ 0.32
CEP290O15078 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.02■□□□□ 0.32
CEP290O15078 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.02■□□□□ 0.32
CEP290O15078 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.02■□□□□ 0.32
CEP290O15078 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CEP290O15078 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CEP290O15078 SLC25A24-204ENST00000569674 2357 ntBASIC17.02■□□□□ 0.32
CEP290O15078 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.02■□□□□ 0.32
CEP290O15078 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.02■□□□□ 0.32
CEP290O15078 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.02■□□□□ 0.32
CEP290O15078 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CEP290O15078 AL353770.1-201ENST00000614915 403 ntBASIC17.02■□□□□ 0.32
CEP290O15078 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CEP290O15078 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CEP290O15078 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms