Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.81■□□□□ 0.28
SOX1O00570 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.81■□□□□ 0.28
SOX1O00570 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.81■□□□□ 0.28
SOX1O00570 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.81■□□□□ 0.28
SOX1O00570 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SOX1O00570 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 U82695.1-201ENST00000635752 1889 ntBASIC16.8■□□□□ 0.28
SOX1O00570 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 DPM3-202ENST00000368399 517 ntBASIC16.8■□□□□ 0.28
SOX1O00570 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.8■□□□□ 0.28
SOX1O00570 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.8■□□□□ 0.28
SOX1O00570 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.8■□□□□ 0.28
SOX1O00570 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.8■□□□□ 0.28
SOX1O00570 RTN3P1-201ENST00000536295 711 ntBASIC16.8■□□□□ 0.28
SOX1O00570 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.8■□□□□ 0.28
SOX1O00570 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 AC000095.1-201ENST00000603208 874 ntBASIC16.8■□□□□ 0.28
SOX1O00570 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 AC022748.3-201ENST00000621828 275 ntBASIC16.8■□□□□ 0.28
SOX1O00570 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.8■□□□□ 0.28
SOX1O00570 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX1O00570 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SOX1O00570 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX1O00570 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 AC116353.5-201ENST00000638148 1699 ntBASIC16.79■□□□□ 0.28
SOX1O00570 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.79■□□□□ 0.28
SOX1O00570 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.79■□□□□ 0.28
SOX1O00570 PDIA3P2-201ENST00000428073 158 ntBASIC16.79■□□□□ 0.28
SOX1O00570 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX1O00570 IGHV3-37-201ENST00000518544 340 ntBASIC16.79■□□□□ 0.28
SOX1O00570 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.79■□□□□ 0.28
SOX1O00570 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX1O00570 AC015910.1-201ENST00000579400 975 ntBASIC16.79■□□□□ 0.28
SOX1O00570 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms