Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CDC7O00311 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDC7O00311 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 CEND1P1-201ENST00000451006 455 ntBASIC15.76■□□□□ 0.11
CDC7O00311 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.76■□□□□ 0.11
CDC7O00311 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.76■□□□□ 0.11
CDC7O00311 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.76■□□□□ 0.11
CDC7O00311 AC243562.2-201ENST00000561247 970 ntBASIC15.76■□□□□ 0.11
CDC7O00311 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.76■□□□□ 0.11
CDC7O00311 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDC7O00311 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 AC126177.1-201ENST00000547829 2218 ntBASIC15.76■□□□□ 0.11
CDC7O00311 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 ELL2P1-201ENST00000413990 1906 ntBASIC15.76■□□□□ 0.11
CDC7O00311 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDC7O00311 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC7O00311 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC7O00311 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.75■□□□□ 0.11
CDC7O00311 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CDC7O00311 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.75■□□□□ 0.11
CDC7O00311 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDC7O00311 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.75■□□□□ 0.11
CDC7O00311 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CDC7O00311 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.75■□□□□ 0.11
CDC7O00311 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.75■□□□□ 0.11
CDC7O00311 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.75■□□□□ 0.11
CDC7O00311 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.75■□□□□ 0.11
CDC7O00311 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.75■□□□□ 0.11
CDC7O00311 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.75■□□□□ 0.11
CDC7O00311 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.75■□□□□ 0.11
CDC7O00311 AC104640.1-201ENST00000562617 2109 ntBASIC15.75■□□□□ 0.11
CDC7O00311 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.75■□□□□ 0.11
CDC7O00311 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.75■□□□□ 0.11
CDC7O00311 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CDC7O00311 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CDC7O00311 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 DBET-201ENST00000630918 3363 ntBASIC15.75■□□□□ 0.11
CDC7O00311 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 PPT1-215ENST00000641471 2368 ntBASIC15.75■□□□□ 0.11
CDC7O00311 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CDC7O00311 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC7O00311 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 AP3S2-216ENST00000617003 1561 ntBASIC15.75■□□□□ 0.11
CDC7O00311 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDC7O00311 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.74■□□□□ 0.11
CDC7O00311 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC7O00311 AC136621.1-201ENST00000624017 2304 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms