Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AC006449.5-201ENST00000610658 2098 ntBASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AC009477.1-201ENST00000452936 217 ntBASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AC005225.4-201ENST00000557330 545 ntBASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AC063926.2-201ENST00000623766 1308 ntBASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA3F8WFD2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC009407.1-201ENST00000568958 598 ntBASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 REXO1L8P-201ENST00000604378 1897 ntBASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC026979.3-201ENST00000607315 403 ntBASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AL844908.2-201ENST00000609461 460 ntBASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC008738.7-201ENST00000609744 511 ntBASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 AC006449.6-201ENST00000612330 2296 ntBASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms