Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.24■□□□□ 0.03
LRIT2A6NDA9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRIT2A6NDA9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 AC125807.1-201ENST00000483097 614 ntBASIC15.23■□□□□ 0.03
LRIT2A6NDA9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 AC067863.1-201ENST00000494933 530 ntBASIC15.23■□□□□ 0.03
LRIT2A6NDA9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 AL589739.1-201ENST00000607720 493 ntBASIC15.23■□□□□ 0.03
LRIT2A6NDA9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRIT2A6NDA9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 CETN4P-206ENST00000642099 2168 ntBASIC15.22■□□□□ 0.03
LRIT2A6NDA9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 FO393414.2-201ENST00000405153 598 ntBASIC15.22■□□□□ 0.03
LRIT2A6NDA9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 FAM86GP-201ENST00000448322 971 ntBASIC15.22■□□□□ 0.03
LRIT2A6NDA9 PHKG1P2-201ENST00000457537 863 ntBASIC15.22■□□□□ 0.03
LRIT2A6NDA9 AC092183.1-201ENST00000469884 875 ntBASIC15.22■□□□□ 0.03
LRIT2A6NDA9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 AL450472.2-201ENST00000603663 1156 ntBASIC15.22■□□□□ 0.03
LRIT2A6NDA9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRIT2A6NDA9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms