Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 APOA2-204ENST00000464492 530 ntTSL 3 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 AC079328.1-201ENST00000560358 952 ntBASIC21.4■■□□□ 1.02
SBNO1A3KN83 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC21.4■■□□□ 1.02
SBNO1A3KN83 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SBNO1A3KN83 REXO1L1P-202ENST00000608646 1974 ntBASIC21.39■■□□□ 1.02
SBNO1A3KN83 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC21.39■■□□□ 1.02
SBNO1A3KN83 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SBNO1A3KN83 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SBNO1A3KN83 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SBNO1A3KN83 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SBNO1A3KN83 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SBNO1A3KN83 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SBNO1A3KN83 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
SBNO1A3KN83 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC21.39■■□□□ 1.02
SBNO1A3KN83 AP001582.1-201ENST00000525856 295 ntBASIC21.39■■□□□ 1.02
SBNO1A3KN83 AC016629.1-201ENST00000596579 586 ntBASIC21.39■■□□□ 1.02
SBNO1A3KN83 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
SBNO1A3KN83 ALOX12P2-203ENST00000570921 1945 ntBASIC21.39■■□□□ 1.01
SBNO1A3KN83 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SBNO1A3KN83 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.39■■□□□ 1.01
SBNO1A3KN83 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SBNO1A3KN83 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC21.39■■□□□ 1.01
SBNO1A3KN83 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SBNO1A3KN83 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SBNO1A3KN83 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SBNO1A3KN83 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 ADM-202ENST00000524948 584 ntTSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 AC132938.4-201ENST00000623835 848 ntBASIC21.38■■□□□ 1.01
SBNO1A3KN83 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 AC092171.3-201ENST00000610122 2651 ntBASIC21.38■■□□□ 1.01
SBNO1A3KN83 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SBNO1A3KN83 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SBNO1A3KN83 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SBNO1A3KN83 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.37■■□□□ 1.01
SBNO1A3KN83 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.37■■□□□ 1.01
SBNO1A3KN83 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SBNO1A3KN83 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SBNO1A3KN83 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SBNO1A3KN83 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SBNO1A3KN83 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SBNO1A3KN83 CD8B2-202ENST00000417670 633 ntBASIC21.37■■□□□ 1.01
SBNO1A3KN83 HOMER2P2-201ENST00000451621 847 ntBASIC21.37■■□□□ 1.01
SBNO1A3KN83 REEP1-202ENST00000453231 940 ntTSL 2 BASIC21.37■■□□□ 1.01
SBNO1A3KN83 HIST2H2BC-201ENST00000498492 580 ntBASIC21.37■■□□□ 1.01
SBNO1A3KN83 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21.37■■□□□ 1.01
SBNO1A3KN83 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
SBNO1A3KN83 AC020914.3-201ENST00000594712 304 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms