Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRDV1A0A1B0GX56 AC005332.1-201ENST00000577698 1310 ntBASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 AJ011931.1-201ENST00000618749 2492 ntBASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 AC099336.1-202ENST00000602961 463 ntBASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 GGTLC5P-201ENST00000617623 998 ntBASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 AC139749.1-202ENST00000617529 3139 ntBASIC14.15□□□□□ -0.14
TRDV1A0A1B0GX56 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRDV1A0A1B0GX56 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 RCN1P1-201ENST00000400413 996 ntBASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 RBM17P3-201ENST00000417687 1192 ntBASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AC012615.1-201ENST00000565797 1299 ntBASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRDV1A0A1B0GX56 AC104581.4-201ENST00000623126 3052 ntBASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRDV1A0A1B0GX56 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms