Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 AP000347.1-202ENST00000435868 847 ntBASIC18.32■□□□□ 0.52
CLIC4Q9Y696 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 AC243562.2-201ENST00000561247 970 ntBASIC18.32■□□□□ 0.52
CLIC4Q9Y696 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 MIR4313-201ENST00000580760 101 ntBASIC18.32■□□□□ 0.52
CLIC4Q9Y696 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC4Q9Y696 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 REXO1L1P-202ENST00000608646 1974 ntBASIC18.31■□□□□ 0.52
CLIC4Q9Y696 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 RPS8P6-201ENST00000426177 609 ntBASIC18.31■□□□□ 0.52
CLIC4Q9Y696 HTR5BP-201ENST00000430851 1154 ntBASIC18.31■□□□□ 0.52
CLIC4Q9Y696 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 AC069335.1-201ENST00000489972 472 ntBASIC18.31■□□□□ 0.52
CLIC4Q9Y696 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.31■□□□□ 0.52
CLIC4Q9Y696 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 TSPY26P-202ENST00000565928 3884 ntBASIC18.3■□□□□ 0.52
CLIC4Q9Y696 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 AP002414.2-201ENST00000591780 3365 ntBASIC18.3■□□□□ 0.52
CLIC4Q9Y696 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 SLC25A39P2-201ENST00000537614 270 ntBASIC18.3■□□□□ 0.52
CLIC4Q9Y696 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC4Q9Y696 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms