Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 REXO1L8P-201ENST00000604378 1897 ntBASIC16.63■□□□□ 0.25
HCFC2Q9Y5Z7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC2Q9Y5Z7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC136604.1-201ENST00000418535 575 ntBASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 ZNF767P-206ENST00000513792 565 ntBASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 HNRNPUP1-201ENST00000554987 333 ntBASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 DUX4L45-201ENST00000566406 1057 ntBASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 GNRHR2-203ENST00000581100 1187 ntBASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC008687.7-202ENST00000637404 953 ntBASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC134407.2-201ENST00000625089 1978 ntBASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC2Q9Y5Z7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 REXO1L1P-202ENST00000608646 1974 ntBASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AC000095.1-201ENST00000603208 874 ntBASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AC091271.1-201ENST00000611877 1162 ntBASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 AP001282.1-201ENST00000531301 1499 ntBASIC16.61■□□□□ 0.25
HCFC2Q9Y5Z7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 AC022211.2-201ENST00000585075 2527 ntBASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC2Q9Y5Z7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms