Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AC074386.1-202ENST00000463561 864 ntBASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AC112191.1-201ENST00000523689 701 ntBASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
POLR1DQ9Y2S0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 WASH6P-202ENST00000359512 1437 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 KRT18P2-201ENST00000447938 1258 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 AC093724.1-201ENST00000448659 1027 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 KRT18P3-201ENST00000451602 1288 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 SLC25A1P1-201ENST00000528351 927 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 PDPK2P-202ENST00000562415 1191 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 AC140113.2-201ENST00000604370 208 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 BX640515.1-201ENST00000617215 977 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 PMS2P7-201ENST00000506558 1336 ntBASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR1DQ9Y2S0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR1DQ9Y2S0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms