Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX2IPQ9Y2D8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 PCDHB19P-201ENST00000570871 2371 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AL645728.1-201ENST00000366221 2101 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 GNAQP1-201ENST00000444815 1067 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 MIR6752-201ENST00000618442 71 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AL031731.1-201ENST00000642131 2094 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 AL513477.1-201ENST00000602865 2407 ntBASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSX2IPQ9Y2D8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 GPR53P-205ENST00000457298 1084 ntBASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 AC055876.2-201ENST00000531834 546 ntBASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.27■□□□□ 0.36
SSX2IPQ9Y2D8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 AC006538.1-201ENST00000567905 1585 ntBASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SSX2IPQ9Y2D8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms