Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 AL590627.1-203ENST00000421194 1026 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 FDX1P1-201ENST00000449115 551 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 RPL13AP23-201ENST00000480739 586 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 OR7E47P-204ENST00000575924 449 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 CYP2A7P1-201ENST00000595391 815 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 AC006449.6-201ENST00000612330 2296 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 KRT8P39-201ENST00000396270 1433 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HHLA3Q9XRX5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 SLC22A20-204ENST00000530038 1673 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AC104109.2-201ENST00000602919 1418 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 MIR4515-201ENST00000584082 81 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AL645728.2-201ENST00000641974 660 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 MIR600HG-201ENST00000449175 5984 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AC139749.1-202ENST00000617529 3139 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 C8orf49-201ENST00000525043 1968 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 IL9RP2-201ENST00000423948 1312 ntBASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HHLA3Q9XRX5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.8□□□□□ -0.52
HHLA3Q9XRX5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms