Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SYNPO2Q9UMS6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AC006449.5-201ENST00000610658 2098 ntBASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AC008735.3-201ENST00000596646 500 ntBASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 CU634019.7-201ENST00000624153 1185 ntBASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 FP236241.2-201ENST00000624906 1185 ntBASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 LINC02447-202ENST00000501888 2146 ntBASIC18.28■□□□□ 0.52
SYNPO2Q9UMS6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 BOLA2P3-201ENST00000404566 256 ntBASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 ATP5G2P4-201ENST00000442175 420 ntBASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 ACA64.2-201ENST00000459014 129 ntBASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 USP32P1-208ENST00000506594 1164 ntBASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 KRT17P8-201ENST00000540749 863 ntBASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 MIR5189-201ENST00000577370 114 ntBASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNPO2Q9UMS6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNPO2Q9UMS6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNPO2Q9UMS6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SYNPO2Q9UMS6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNPO2Q9UMS6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNPO2Q9UMS6 C1QBPP1-201ENST00000400117 770 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms