Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 AC136621.1-201ENST00000624017 2304 ntBASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 AC002056.1-201ENST00000395613 760 ntBASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 MRPL3P1-201ENST00000400109 1033 ntBASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 PRYP6-201ENST00000514804 343 ntBASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 BCAR1-209ENST00000546196 1340 ntBASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 LINC02228-204ENST00000642115 2962 ntBASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
THUMPD1Q9NXG2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.14■□□□□ 0.01
THUMPD1Q9NXG2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms