Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 GAPDHP21-201ENST00000450301 1010 ntBASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AC245100.5-201ENST00000452108 331 ntBASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 BANF1P1-201ENST00000553684 263 ntBASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 MIR4453-201ENST00000584019 89 ntBASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CUEDC1Q9NWM3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 BASP1P1-201ENST00000430708 665 ntBASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 AC093214.1-201ENST00000511688 1107 ntBASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 AL512356.2-201ENST00000546955 174 ntBASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CUEDC1Q9NWM3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms