Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 AC007950.2-201ENST00000615045 2347 ntBASIC19.2■□□□□ 0.66
SALL1Q9NSC2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 CDC14C-201ENST00000428251 1719 ntBASIC19.2■□□□□ 0.66
SALL1Q9NSC2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SALL1Q9NSC2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 ARSEP1-201ENST00000420443 635 ntBASIC19.19■□□□□ 0.66
SALL1Q9NSC2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 SLED1-202ENST00000512051 380 ntBASIC19.19■□□□□ 0.66
SALL1Q9NSC2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 AC036164.1-201ENST00000570544 333 ntBASIC19.19■□□□□ 0.66
SALL1Q9NSC2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 AL162274.1-201ENST00000617191 1098 ntBASIC19.19■□□□□ 0.66
SALL1Q9NSC2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SALL1Q9NSC2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 CLK3P2-201ENST00000427566 1453 ntBASIC19.18■□□□□ 0.66
SALL1Q9NSC2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 AC079776.1-201ENST00000401540 1152 ntBASIC19.18■□□□□ 0.66
SALL1Q9NSC2 KRT18P64-201ENST00000434946 1219 ntBASIC19.18■□□□□ 0.66
SALL1Q9NSC2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 AC104596.2-201ENST00000512793 793 ntBASIC19.18■□□□□ 0.66
SALL1Q9NSC2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SALL1Q9NSC2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms