Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHB16Q9NRJ7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 MRPL20P1-201ENST00000400819 433 ntBASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 TPM4P1-201ENST00000436100 807 ntBASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 AC005593.1-201ENST00000624894 515 ntBASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
PCDHB16Q9NRJ7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 REXO1L8P-201ENST00000604378 1897 ntBASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 KRT18P27-201ENST00000427733 1299 ntBASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 IGHV3-65-201ENST00000523210 341 ntBASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 AL603832.2-201ENST00000566195 2125 ntBASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 AC079781.5-202ENST00000641784 3743 ntBASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHB16Q9NRJ7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms