Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC092658.1-201ENST00000505836 891 ntBASIC17.82■□□□□ 0.44
VTA1Q9NP79 AC068587.3-201ENST00000526613 355 ntBASIC17.82■□□□□ 0.44
VTA1Q9NP79 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTA1Q9NP79 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTA1Q9NP79 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTA1Q9NP79 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTA1Q9NP79 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VTA1Q9NP79 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTA1Q9NP79 AC012313.1-201ENST00000593393 3059 ntBASIC17.82■□□□□ 0.44
VTA1Q9NP79 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTA1Q9NP79 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTA1Q9NP79 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 AC092171.3-201ENST00000610122 2651 ntBASIC17.81■□□□□ 0.44
VTA1Q9NP79 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 BNIP3P42-201ENST00000454982 569 ntBASIC17.81■□□□□ 0.44
VTA1Q9NP79 CTBP2P5-201ENST00000454986 1264 ntBASIC17.81■□□□□ 0.44
VTA1Q9NP79 KRT18P43-201ENST00000469825 1281 ntBASIC17.81■□□□□ 0.44
VTA1Q9NP79 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 BNIP3P29-201ENST00000598302 571 ntBASIC17.81■□□□□ 0.44
VTA1Q9NP79 AC011447.5-201ENST00000616168 564 ntBASIC17.81■□□□□ 0.44
VTA1Q9NP79 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 AL607033.1-201ENST00000623900 1599 ntBASIC17.81■□□□□ 0.44
VTA1Q9NP79 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTA1Q9NP79 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VTA1Q9NP79 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 AC009486.1-201ENST00000569860 813 ntBASIC17.8■□□□□ 0.44
VTA1Q9NP79 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 FLJ38576-201ENST00000623820 2459 ntBASIC17.8■□□□□ 0.44
VTA1Q9NP79 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTA1Q9NP79 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VTA1Q9NP79 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.79■□□□□ 0.44
VTA1Q9NP79 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTA1Q9NP79 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
VTA1Q9NP79 AC006449.6-201ENST00000612330 2296 ntBASIC17.79■□□□□ 0.44
VTA1Q9NP79 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
VTA1Q9NP79 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VTA1Q9NP79 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms