Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NEUROD4Q9HD90 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 DNAJB3-202ENST00000449667 1266 ntBASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 AL135744.1-201ENST00000565098 629 ntBASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 AC008267.7-201ENST00000624570 1194 ntBASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 AC092865.6-201ENST00000642101 219 ntBASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEUROD4Q9HD90 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 SPTSSB-204ENST00000617024 1292 ntBASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NEUROD4Q9HD90 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms