Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.43■□□□□ 0.06
PIF1Q9H611 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.43■□□□□ 0.06
PIF1Q9H611 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.43■□□□□ 0.06
PIF1Q9H611 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.43■□□□□ 0.06
PIF1Q9H611 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.43■□□□□ 0.06
PIF1Q9H611 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.43■□□□□ 0.06
PIF1Q9H611 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
PIF1Q9H611 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.43■□□□□ 0.06
PIF1Q9H611 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.43■□□□□ 0.06
PIF1Q9H611 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PIF1Q9H611 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PIF1Q9H611 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.43■□□□□ 0.06
PIF1Q9H611 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PIF1Q9H611 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PIF1Q9H611 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PIF1Q9H611 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.43■□□□□ 0.06
PIF1Q9H611 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
PIF1Q9H611 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.43■□□□□ 0.06
PIF1Q9H611 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PIF1Q9H611 MYO15B-237ENST00000642007 4893 ntBASIC15.43■□□□□ 0.06
PIF1Q9H611 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PIF1Q9H611 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PIF1Q9H611 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.42■□□□□ 0.06
PIF1Q9H611 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.42■□□□□ 0.06
PIF1Q9H611 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PIF1Q9H611 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.42■□□□□ 0.06
PIF1Q9H611 EMBP1-201ENST00000458200 901 ntBASIC15.42■□□□□ 0.06
PIF1Q9H611 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.42■□□□□ 0.06
PIF1Q9H611 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.42■□□□□ 0.06
PIF1Q9H611 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PIF1Q9H611 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.42■□□□□ 0.06
PIF1Q9H611 AL160237.2-201ENST00000556165 472 ntBASIC15.42■□□□□ 0.06
PIF1Q9H611 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 AC006557.2-201ENST00000592985 1240 ntBASIC15.42■□□□□ 0.06
PIF1Q9H611 PGM5P2-202ENST00000637225 1043 ntBASIC15.42■□□□□ 0.06
PIF1Q9H611 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PIF1Q9H611 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.42■□□□□ 0.06
PIF1Q9H611 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 RPS2P28-201ENST00000314255 741 ntBASIC15.41■□□□□ 0.06
PIF1Q9H611 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.41■□□□□ 0.06
PIF1Q9H611 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.41■□□□□ 0.06
PIF1Q9H611 LAGE3P1-201ENST00000425356 484 ntBASIC15.41■□□□□ 0.06
PIF1Q9H611 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.41■□□□□ 0.06
PIF1Q9H611 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 AC073648.2-201ENST00000510116 352 ntBASIC15.41■□□□□ 0.06
PIF1Q9H611 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.41■□□□□ 0.06
PIF1Q9H611 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.41■□□□□ 0.06
PIF1Q9H611 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PIF1Q9H611 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms