Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 AC009477.1-201ENST00000452936 217 ntBASIC18.88■□□□□ 0.61
RNF41Q9H4P4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RNF41Q9H4P4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.87■□□□□ 0.61
RNF41Q9H4P4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 SDHAP3-202ENST00000515467 728 ntBASIC18.87■□□□□ 0.61
RNF41Q9H4P4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 AC022144.1-201ENST00000602255 1580 ntBASIC18.87■□□□□ 0.61
RNF41Q9H4P4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF41Q9H4P4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 BTBD7P1-201ENST00000447253 1453 ntBASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 SPCS2P1-201ENST00000561636 679 ntBASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AL096865.1-201ENST00000606796 927 ntBASIC18.86■□□□□ 0.61
RNF41Q9H4P4 AJ011932.1-201ENST00000621707 465 ntBASIC18.86■□□□□ 0.61
RNF41Q9H4P4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RNF41Q9H4P4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms