Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.49■□□□□ 0.23
CDCA3Q99618 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.49■□□□□ 0.23
CDCA3Q99618 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDCA3Q99618 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.49■□□□□ 0.23
CDCA3Q99618 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.49■□□□□ 0.23
CDCA3Q99618 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDCA3Q99618 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.49■□□□□ 0.23
CDCA3Q99618 MTX1P1-201ENST00000440904 838 ntBASIC16.49■□□□□ 0.23
CDCA3Q99618 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.49■□□□□ 0.23
CDCA3Q99618 RNA5SP486-201ENST00000515961 83 ntBASIC16.49■□□□□ 0.23
CDCA3Q99618 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.49■□□□□ 0.23
CDCA3Q99618 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.49■□□□□ 0.23
CDCA3Q99618 EEF1DP1-201ENST00000585891 896 ntBASIC16.49■□□□□ 0.23
CDCA3Q99618 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDCA3Q99618 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.49■□□□□ 0.23
CDCA3Q99618 AC145423.3-201ENST00000615987 467 ntBASIC16.49■□□□□ 0.23
CDCA3Q99618 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDCA3Q99618 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.49■□□□□ 0.23
CDCA3Q99618 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 KRT8P35-201ENST00000483942 1338 ntBASIC16.48■□□□□ 0.23
CDCA3Q99618 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 HOMER2P2-201ENST00000451621 847 ntBASIC16.48■□□□□ 0.23
CDCA3Q99618 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.48■□□□□ 0.23
CDCA3Q99618 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 AP006547.1-201ENST00000563435 692 ntBASIC16.48■□□□□ 0.23
CDCA3Q99618 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.48■□□□□ 0.23
CDCA3Q99618 AC020914.3-201ENST00000594712 304 ntBASIC16.48■□□□□ 0.23
CDCA3Q99618 AC005695.3-201ENST00000614522 232 ntBASIC16.48■□□□□ 0.23
CDCA3Q99618 AC006453.4-201ENST00000636949 1252 ntBASIC16.48■□□□□ 0.23
CDCA3Q99618 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 AC015818.8-201ENST00000587907 1519 ntBASIC16.48■□□□□ 0.23
CDCA3Q99618 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CDCA3Q99618 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDCA3Q99618 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.47■□□□□ 0.23
CDCA3Q99618 AC134407.2-201ENST00000625089 1978 ntBASIC16.47■□□□□ 0.23
CDCA3Q99618 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDCA3Q99618 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDCA3Q99618 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.47■□□□□ 0.23
CDCA3Q99618 AL138709.1-201ENST00000614840 1693 ntBASIC16.47■□□□□ 0.23
CDCA3Q99618 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.47■□□□□ 0.23
CDCA3Q99618 AC005915.1-201ENST00000624912 2018 ntBASIC16.47■□□□□ 0.23
CDCA3Q99618 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDCA3Q99618 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms