Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 AC099568.2-201ENST00000609194 695 ntBASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
CCDC85AQ96PX6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 TTTY23B-201ENST00000442790 549 ntBASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 RARRES2P5-201ENST00000564013 466 ntBASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 AL359881.2-201ENST00000602973 570 ntBASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC85AQ96PX6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AC079776.1-201ENST00000401540 1152 ntBASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 AL158212.4-201ENST00000624062 1286 ntBASIC19.83■□□□□ 0.77
CCDC85AQ96PX6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC85AQ96PX6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AP003680.1-201ENST00000598970 3660 ntBASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AC006449.6-201ENST00000612330 2296 ntBASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms