Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.11■□□□□ 0.33
ALPK3Q96L96 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALPK3Q96L96 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 AC098935.1-201ENST00000446057 611 ntBASIC17.1■□□□□ 0.33
ALPK3Q96L96 NOC2LP1-201ENST00000450578 752 ntBASIC17.1■□□□□ 0.33
ALPK3Q96L96 AC100850.1-201ENST00000506768 649 ntBASIC17.1■□□□□ 0.33
ALPK3Q96L96 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALPK3Q96L96 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.1■□□□□ 0.33
ALPK3Q96L96 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 CD8B2-202ENST00000417670 633 ntBASIC17.09■□□□□ 0.33
ALPK3Q96L96 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 AC012618.1-201ENST00000461223 412 ntBASIC17.09■□□□□ 0.33
ALPK3Q96L96 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 HLA-A-202ENST00000376806 1854 ntBASIC17.09■□□□□ 0.33
ALPK3Q96L96 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.09■□□□□ 0.33
ALPK3Q96L96 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALPK3Q96L96 AC148477.4-201ENST00000613430 1793 ntBASIC17.08■□□□□ 0.33
ALPK3Q96L96 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 AL596276.2-201ENST00000447525 331 ntBASIC17.08■□□□□ 0.33
ALPK3Q96L96 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 IGLV3-15-201ENST00000518356 244 ntBASIC17.08■□□□□ 0.33
ALPK3Q96L96 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 AL161670.2-201ENST00000557650 1227 ntBASIC17.08■□□□□ 0.33
ALPK3Q96L96 MIR4783-201ENST00000580343 82 ntBASIC17.08■□□□□ 0.33
ALPK3Q96L96 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.08■□□□□ 0.33
ALPK3Q96L96 AP001002.3-201ENST00000623482 206 ntBASIC17.08■□□□□ 0.33
ALPK3Q96L96 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALPK3Q96L96 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALPK3Q96L96 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
ALPK3Q96L96 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALPK3Q96L96 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALPK3Q96L96 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALPK3Q96L96 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.08■□□□□ 0.32
ALPK3Q96L96 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALPK3Q96L96 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms