Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SIPA1Q96FS4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIPA1Q96FS4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SIPA1Q96FS4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.07■□□□□ 0.16
SIPA1Q96FS4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 ACA64.2-201ENST00000459014 129 ntBASIC16.07■□□□□ 0.16
SIPA1Q96FS4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 RAB43P1-201ENST00000561790 589 ntBASIC16.07■□□□□ 0.16
SIPA1Q96FS4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 WFDC1-204ENST00000613603 549 ntBASIC16.07■□□□□ 0.16
SIPA1Q96FS4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 PCDHA12-202ENST00000613593 2588 ntBASIC16.07■□□□□ 0.16
SIPA1Q96FS4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SIPA1Q96FS4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 AZGP1P1-201ENST00000411909 902 ntBASIC16.06■□□□□ 0.16
SIPA1Q96FS4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 AC112492.5-201ENST00000421897 457 ntBASIC16.06■□□□□ 0.16
SIPA1Q96FS4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 LINC01115-203ENST00000606068 577 ntBASIC16.06■□□□□ 0.16
SIPA1Q96FS4 AL033527.5-201ENST00000641382 801 ntBASIC16.06■□□□□ 0.16
SIPA1Q96FS4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.06■□□□□ 0.16
SIPA1Q96FS4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms