Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 AL353705.2-201ENST00000428243 662 ntBASIC15.55■□□□□ 0.08
RNF31Q96EP0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 TEX28P1-201ENST00000613479 1221 ntBASIC15.55■□□□□ 0.08
RNF31Q96EP0 TEX28P2-201ENST00000617764 1221 ntBASIC15.55■□□□□ 0.08
RNF31Q96EP0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF31Q96EP0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF31Q96EP0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 GGT4P-201ENST00000623672 1708 ntBASIC15.54■□□□□ 0.08
RNF31Q96EP0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 AC009407.1-201ENST00000568958 598 ntBASIC15.54■□□□□ 0.08
RNF31Q96EP0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 AC004790.1-201ENST00000612686 536 ntBASIC15.54■□□□□ 0.08
RNF31Q96EP0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
RNF31Q96EP0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF31Q96EP0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 CETN4P-206ENST00000642099 2168 ntBASIC15.53■□□□□ 0.08
RNF31Q96EP0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF31Q96EP0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF31Q96EP0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF31Q96EP0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms