Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 REXO1L6P-201ENST00000603433 1515 ntBASIC16.27■□□□□ 0.2
SYNPOQ8N3V7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 AL136982.4-201ENST00000437689 1740 ntBASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 AC005622.1-201ENST00000636801 1703 ntBASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 RNF216P1-203ENST00000404404 2427 ntBASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.27■□□□□ 0.19
SYNPOQ8N3V7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 SLC25A47P1-201ENST00000531577 414 ntBASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 AL022328.1-201ENST00000610050 478 ntBASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 AC018665.1-201ENST00000622927 1362 ntBASIC16.26■□□□□ 0.19
SYNPOQ8N3V7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 AC018695.7-201ENST00000624587 2492 ntBASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 ACTBP11-201ENST00000436287 1126 ntBASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 KLF2P4-201ENST00000451959 1225 ntBASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 CROCCP4-201ENST00000457096 498 ntBASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 ENPP7P5-201ENST00000541031 1031 ntBASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms