Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AC068587.6-202ENST00000641839 5619 ntBASIC17.44■□□□□ 0.38
VPS52Q8N1B4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AL512361.1-201ENST00000554200 418 ntBASIC17.44■□□□□ 0.38
VPS52Q8N1B4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AC024267.1-201ENST00000582320 895 ntBASIC17.44■□□□□ 0.38
VPS52Q8N1B4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS52Q8N1B4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AL603756.1-201ENST00000606511 2163 ntBASIC17.43■□□□□ 0.38
VPS52Q8N1B4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AC092171.3-201ENST00000610122 2651 ntBASIC17.43■□□□□ 0.38
VPS52Q8N1B4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 SPDYE19P-201ENST00000338590 713 ntBASIC17.43■□□□□ 0.38
VPS52Q8N1B4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 DFFBP1-201ENST00000433250 979 ntBASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AC010336.2-201ENST00000564226 506 ntBASIC17.43■□□□□ 0.38
VPS52Q8N1B4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AL139011.1-202ENST00000642063 584 ntBASIC17.43■□□□□ 0.38
VPS52Q8N1B4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 AL512652.2-201ENST00000625156 1716 ntBASIC17.43■□□□□ 0.38
VPS52Q8N1B4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS52Q8N1B4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VPS52Q8N1B4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS52Q8N1B4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS52Q8N1B4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.42■□□□□ 0.38
VPS52Q8N1B4 AL589702.1-201ENST00000641229 1509 ntBASIC17.42■□□□□ 0.38
VPS52Q8N1B4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS52Q8N1B4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms