Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.43■□□□□ 0.22
SIX5Q8N196 MIR1247-201ENST00000408206 136 ntBASIC16.43■□□□□ 0.22
SIX5Q8N196 GPAA1P2-201ENST00000417923 928 ntBASIC16.43■□□□□ 0.22
SIX5Q8N196 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 HIST3H2BA-201ENST00000436555 524 ntBASIC16.43■□□□□ 0.22
SIX5Q8N196 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.43■□□□□ 0.22
SIX5Q8N196 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AC010328.2-201ENST00000597698 1111 ntBASIC16.43■□□□□ 0.22
SIX5Q8N196 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AC244517.3-201ENST00000616254 1235 ntBASIC16.43■□□□□ 0.22
SIX5Q8N196 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SIX5Q8N196 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AC092053.1-201ENST00000605787 1936 ntBASIC16.43■□□□□ 0.22
SIX5Q8N196 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SIX5Q8N196 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SIX5Q8N196 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SIX5Q8N196 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 ELK2AP-201ENST00000392510 1007 ntBASIC16.42■□□□□ 0.22
SIX5Q8N196 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.42■□□□□ 0.22
SIX5Q8N196 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 YBX1P6-201ENST00000442962 1002 ntBASIC16.42■□□□□ 0.22
SIX5Q8N196 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.42■□□□□ 0.22
SIX5Q8N196 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.42■□□□□ 0.22
SIX5Q8N196 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SIX5Q8N196 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX5Q8N196 PTP4A1P2-201ENST00000546033 454 ntBASIC16.42■□□□□ 0.22
SIX5Q8N196 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.42■□□□□ 0.22
SIX5Q8N196 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SIX5Q8N196 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SIX5Q8N196 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX5Q8N196 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX5Q8N196 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX5Q8N196 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX5Q8N196 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX5Q8N196 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 AL136379.1-201ENST00000623471 2642 ntBASIC16.41■□□□□ 0.22
SIX5Q8N196 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX5Q8N196 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SIX5Q8N196 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX5Q8N196 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX5Q8N196 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.41■□□□□ 0.22
SIX5Q8N196 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.41■□□□□ 0.22
SIX5Q8N196 AC068587.3-201ENST00000526613 355 ntBASIC16.41■□□□□ 0.22
SIX5Q8N196 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX5Q8N196 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIX5Q8N196 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.41■□□□□ 0.22
SIX5Q8N196 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms