Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 KLF2P2-201ENST00000416807 1039 ntBASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AC106820.3-201ENST00000561653 397 ntBASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AC005730.2-201ENST00000564549 1184 ntBASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AC091271.1-201ENST00000611877 1162 ntBASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL27A1Q8IZC6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.77□□□□□ -0.04
COL27A1Q8IZC6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.77□□□□□ -0.04
COL27A1Q8IZC6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL27A1Q8IZC6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.77□□□□□ -0.04
COL27A1Q8IZC6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
COL27A1Q8IZC6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 AC004898.1-201ENST00000451057 766 ntBASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 AP005019.2-201ENST00000615104 511 ntBASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 AHCYP2-201ENST00000430630 1300 ntBASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 AC124067.4-201ENST00000519691 2379 ntBASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL27A1Q8IZC6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 AL354989.2-201ENST00000435838 1540 ntBASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 AL022328.3-201ENST00000607943 679 ntBASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 AL023775.1-201ENST00000454907 1746 ntBASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.76□□□□□ -0.05
COL27A1Q8IZC6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms