Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 AC018892.3-201ENST00000623986 2499 ntBASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 AL079307.3-201ENST00000556114 283 ntBASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCUBE3Q8IX30 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 MIR943-201ENST00000401286 94 ntBASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 RPL37AP1-201ENST00000412502 279 ntBASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 AC097493.3-201ENST00000509725 367 ntBASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 AC069120.2-201ENST00000524091 540 ntBASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 FO538757.1-201ENST00000623083 1397 ntBASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCUBE3Q8IX30 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 AC011477.6-201ENST00000604980 1927 ntBASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.86■□□□□ 0.29
SCUBE3Q8IX30 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms