Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
APLFQ8IW19 FAM8A3P-201ENST00000427218 844 ntBASIC16.03■□□□□ 0.16
APLFQ8IW19 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.03■□□□□ 0.16
APLFQ8IW19 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 CXCL1P1-201ENST00000502804 216 ntBASIC16.03■□□□□ 0.16
APLFQ8IW19 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.03■□□□□ 0.16
APLFQ8IW19 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.03■□□□□ 0.16
APLFQ8IW19 AC011467.4-201ENST00000594891 528 ntBASIC16.03■□□□□ 0.16
APLFQ8IW19 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.03■□□□□ 0.16
APLFQ8IW19 AL513210.1-201ENST00000629608 234 ntBASIC16.03■□□□□ 0.16
APLFQ8IW19 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.03■□□□□ 0.16
APLFQ8IW19 AP005117.1-202ENST00000581724 1908 ntBASIC16.03■□□□□ 0.16
APLFQ8IW19 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
APLFQ8IW19 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APLFQ8IW19 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
APLFQ8IW19 PI4KAP1-204ENST00000612579 1703 ntBASIC16.02■□□□□ 0.16
APLFQ8IW19 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.02■□□□□ 0.16
APLFQ8IW19 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.02■□□□□ 0.16
APLFQ8IW19 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
APLFQ8IW19 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
APLFQ8IW19 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.02■□□□□ 0.16
APLFQ8IW19 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
APLFQ8IW19 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
APLFQ8IW19 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.02■□□□□ 0.16
APLFQ8IW19 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
APLFQ8IW19 AC106028.4-201ENST00000614509 607 ntBASIC16.02■□□□□ 0.16
APLFQ8IW19 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
APLFQ8IW19 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
APLFQ8IW19 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APLFQ8IW19 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
APLFQ8IW19 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.02■□□□□ 0.15
APLFQ8IW19 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
APLFQ8IW19 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
APLFQ8IW19 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
APLFQ8IW19 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.02■□□□□ 0.15
APLFQ8IW19 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APLFQ8IW19 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
APLFQ8IW19 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APLFQ8IW19 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.02■□□□□ 0.15
APLFQ8IW19 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.02■□□□□ 0.15
APLFQ8IW19 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
APLFQ8IW19 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.01■□□□□ 0.15
APLFQ8IW19 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.01■□□□□ 0.15
APLFQ8IW19 AC068137.2-201ENST00000605408 478 ntBASIC16.01■□□□□ 0.15
APLFQ8IW19 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.01■□□□□ 0.15
APLFQ8IW19 REXO1L3P-201ENST00000622202 1288 ntBASIC16.01■□□□□ 0.15
APLFQ8IW19 AC092902.6-201ENST00000641783 218 ntBASIC16.01■□□□□ 0.15
APLFQ8IW19 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.01■□□□□ 0.15
APLFQ8IW19 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
APLFQ8IW19 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
APLFQ8IW19 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APLFQ8IW19 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
APLFQ8IW19 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms