Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 AL133466.1-201ENST00000447582 150 ntBASIC19.83■□□□□ 0.77
COL23A1Q86Y22 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 AC134698.3-201ENST00000523880 214 ntBASIC19.83■□□□□ 0.77
COL23A1Q86Y22 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 MIR3907-201ENST00000579424 151 ntBASIC19.83■□□□□ 0.77
COL23A1Q86Y22 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.83■□□□□ 0.77
COL23A1Q86Y22 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL23A1Q86Y22 PCDHB18P-201ENST00000524813 2368 ntBASIC19.83■□□□□ 0.76
COL23A1Q86Y22 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 MIR769-201ENST00000390225 118 ntBASIC19.82■□□□□ 0.76
COL23A1Q86Y22 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 FTLP1-201ENST00000449155 526 ntBASIC19.82■□□□□ 0.76
COL23A1Q86Y22 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 FGFR3P5-201ENST00000564496 886 ntBASIC19.82■□□□□ 0.76
COL23A1Q86Y22 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 AC005332.8-201ENST00000622750 2735 ntBASIC19.82■□□□□ 0.76
COL23A1Q86Y22 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL23A1Q86Y22 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.81■□□□□ 0.76
COL23A1Q86Y22 POU5F1P6-201ENST00000466990 990 ntBASIC19.81■□□□□ 0.76
COL23A1Q86Y22 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 AC138649.2-201ENST00000615886 705 ntBASIC19.81■□□□□ 0.76
COL23A1Q86Y22 AC079336.7-201ENST00000623428 1078 ntBASIC19.81■□□□□ 0.76
COL23A1Q86Y22 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL23A1Q86Y22 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 MAGEA5-201ENST00000446757 942 ntBASIC19.8■□□□□ 0.76
COL23A1Q86Y22 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 AC018635.2-201ENST00000608625 364 ntBASIC19.8■□□□□ 0.76
COL23A1Q86Y22 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 AC134407.2-201ENST00000625089 1978 ntBASIC19.8■□□□□ 0.76
COL23A1Q86Y22 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms