Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 AC006504.5-208ENST00000588784 2401 ntBASIC13.42□□□□□ -0.26
ZNF546Q86UE3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 AC125634.1-201ENST00000438758 1403 ntBASIC13.42□□□□□ -0.26
ZNF546Q86UE3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 HBZP1-201ENST00000354915 429 ntBASIC13.42□□□□□ -0.26
ZNF546Q86UE3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 AC011558.1-201ENST00000623459 338 ntBASIC13.42□□□□□ -0.26
ZNF546Q86UE3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.41□□□□□ -0.26
ZNF546Q86UE3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AC107918.4-201ENST00000641966 3141 ntBASIC13.41□□□□□ -0.26
ZNF546Q86UE3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AL592424.1-201ENST00000563624 1536 ntBASIC13.41□□□□□ -0.26
ZNF546Q86UE3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 BX664615.1-201ENST00000443558 458 ntBASIC13.41□□□□□ -0.26
ZNF546Q86UE3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 HOMER2P1-201ENST00000455653 964 ntBASIC13.41□□□□□ -0.26
ZNF546Q86UE3 YBX1P2-201ENST00000489612 999 ntBASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF546Q86UE3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms