Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 AC079328.2-201ENST00000561241 3354 ntBASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 HNRNPA1P32-201ENST00000396326 963 ntBASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 RN7SL181P-201ENST00000462921 277 ntBASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 AP003419.4-201ENST00000616071 517 ntBASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 ZBTB45P2-201ENST00000452245 1531 ntBASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 RN7SL555P-201ENST00000584742 339 ntBASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC9.71□□□□□ -0.86
VPS13BQ7Z7G8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AL121723.1-201ENST00000445194 1519 ntBASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AR-207ENST00000612010 3896 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AC069218.1-201ENST00000435269 762 ntBASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 IMP3P2-201ENST00000489760 475 ntBASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AL451050.2-201ENST00000606967 682 ntBASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 AHCYP2-201ENST00000430630 1300 ntBASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
VPS13BQ7Z7G8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms