Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NHLRC1Q6VVB1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 LINC02447-202ENST00000501888 2146 ntBASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 AC010491.1-201ENST00000563101 2797 ntBASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 FAM220BP-201ENST00000377689 816 ntBASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 DNAJB3-201ENST00000446806 729 ntBASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 AC069335.1-201ENST00000489972 472 ntBASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 AC093520.2-201ENST00000561830 333 ntBASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 AC022145.2-201ENST00000598203 171 ntBASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NHLRC1Q6VVB1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 UPF3AP3-201ENST00000420996 769 ntBASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 CEND1P1-201ENST00000451006 455 ntBASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NHLRC1Q6VVB1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms