Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 COX20P2-201ENST00000452636 358 ntBASIC19.04■□□□□ 0.64
CTR9Q6PD62 SDHAP3-202ENST00000515467 728 ntBASIC19.04■□□□□ 0.64
CTR9Q6PD62 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AP001282.1-201ENST00000531301 1499 ntBASIC19.03■□□□□ 0.64
CTR9Q6PD62 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AC025048.3-201ENST00000590609 569 ntBASIC19.03■□□□□ 0.64
CTR9Q6PD62 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 AC005702.4-201ENST00000618393 416 ntBASIC19.03■□□□□ 0.64
CTR9Q6PD62 AC004461.2-201ENST00000629517 803 ntBASIC19.03■□□□□ 0.64
CTR9Q6PD62 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTR9Q6PD62 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.03■□□□□ 0.64
CTR9Q6PD62 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 GNAQP1-201ENST00000444815 1067 ntBASIC19.02■□□□□ 0.64
CTR9Q6PD62 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTR9Q6PD62 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.02■□□□□ 0.64
CTR9Q6PD62 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
CTR9Q6PD62 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTR9Q6PD62 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTR9Q6PD62 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTR9Q6PD62 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CTR9Q6PD62 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.02■□□□□ 0.63
CTR9Q6PD62 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTR9Q6PD62 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.02■□□□□ 0.63
CTR9Q6PD62 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.02■□□□□ 0.63
CTR9Q6PD62 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms