Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 AC007274.1-201ENST00000439805 662 ntBASIC18■□□□□ 0.47
CCDC62Q6P9F0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 GPR53P-205ENST00000457298 1084 ntBASIC18■□□□□ 0.47
CCDC62Q6P9F0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 HILS1-202ENST00000545329 423 ntBASIC18■□□□□ 0.47
CCDC62Q6P9F0 AC106886.1-201ENST00000568660 600 ntBASIC18■□□□□ 0.47
CCDC62Q6P9F0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 WFDC1-204ENST00000613603 549 ntBASIC18■□□□□ 0.47
CCDC62Q6P9F0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 FLJ38576-201ENST00000623820 2459 ntBASIC18■□□□□ 0.47
CCDC62Q6P9F0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC62Q6P9F0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 ALOX12P2-203ENST00000570921 1945 ntBASIC18■□□□□ 0.47
CCDC62Q6P9F0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC62Q6P9F0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 CDC14C-201ENST00000428251 1719 ntBASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CCDC62Q6P9F0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 NKILA-202ENST00000614771 2598 ntBASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 TARDBPP1-201ENST00000442013 1203 ntBASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.98■□□□□ 0.47
CCDC62Q6P9F0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms