Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 AC108751.1-201ENST00000490852 363 ntBASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 RNA5SP419-201ENST00000515908 135 ntBASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 AC078925.2-201ENST00000624013 1973 ntBASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 AC023157.3-201ENST00000619086 2088 ntBASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 FDX1P1-201ENST00000449115 551 ntBASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 AC108073.2-201ENST00000464002 357 ntBASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 MIR4751-201ENST00000578027 74 ntBASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM53Q6P2H8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 KRT8P49-201ENST00000604166 1432 ntBASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 AC117489.1-201ENST00000625169 3217 ntBASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 AL356585.2-201ENST00000625078 2396 ntBASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
TMEM53Q6P2H8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM53Q6P2H8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms