Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 POLD2P1-201ENST00000511220 997 ntBASIC16.65■□□□□ 0.26
LRRC38Q5VT99 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 SLC25A39P2-201ENST00000537614 270 ntBASIC16.65■□□□□ 0.26
LRRC38Q5VT99 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC38Q5VT99 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRRC38Q5VT99 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 PHKG1P2-201ENST00000457537 863 ntBASIC16.64■□□□□ 0.25
LRRC38Q5VT99 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 RARRES2P9-201ENST00000565168 469 ntBASIC16.64■□□□□ 0.25
LRRC38Q5VT99 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 AC023157.3-201ENST00000619086 2088 ntBASIC16.64■□□□□ 0.25
LRRC38Q5VT99 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 ELL2P1-201ENST00000413990 1906 ntBASIC16.64■□□□□ 0.25
LRRC38Q5VT99 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 UXT-AS1-201ENST00000590504 1525 ntBASIC16.64■□□□□ 0.25
LRRC38Q5VT99 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC38Q5VT99 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 LINC00554-201ENST00000564841 3011 ntBASIC16.63■□□□□ 0.25
LRRC38Q5VT99 AC092127.1-201ENST00000567093 3455 ntBASIC16.63■□□□□ 0.25
LRRC38Q5VT99 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 AC006486.2-201ENST00000624246 2199 ntBASIC16.63■□□□□ 0.25
LRRC38Q5VT99 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 AC105339.1-204ENST00000636249 355 ntBASIC16.63■□□□□ 0.25
LRRC38Q5VT99 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC38Q5VT99 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms