Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC58Q4VC31 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC58Q4VC31 GGTLC5P-201ENST00000617623 998 ntBASIC14.46□□□□□ -0.09
CCDC58Q4VC31 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC58Q4VC31 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
CCDC58Q4VC31 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC58Q4VC31 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC58Q4VC31 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC58Q4VC31 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 PPT1-215ENST00000641471 2368 ntBASIC14.46□□□□□ -0.1
CCDC58Q4VC31 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC58Q4VC31 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 AC008677.1-201ENST00000519230 1561 ntBASIC14.45□□□□□ -0.1
CCDC58Q4VC31 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC58Q4VC31 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 CICP24-201ENST00000605464 2705 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 AC020658.6-201ENST00000623564 1870 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 ATP5G2P1-201ENST00000433580 426 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 MTDHP3-201ENST00000594186 672 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 MTDHP4-201ENST00000600287 670 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 AC069148.1-201ENST00000608741 768 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 AC010327.5-201ENST00000586923 3061 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC58Q4VC31 TMBIM7P-203ENST00000641617 1718 ntBASIC14.44□□□□□ -0.1
CCDC58Q4VC31 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms